Posters

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Friday, October 24: Poster Pitch and Poster Session I, 7:30-8:00 PM

Poster Stand # Name Title

1

Thomas Atkins (Ayroles Lab)

7:30-7:32 PM

Does Autoimmunity Arise From Immune Systems Living in the Past?

3

Nicolas Ayala (Listgarten Lab)

7:32-7:34 PM

Getting better estimated likelihoods from generative pLMs for zero shot scoring

5

Mara Baylis (Rotation/Brem Lab)

7:34-7:36 PM

Lineage specific selection in Mus spicilegus: a comparative evolutionary genomics study

7

Prakruthi Burra (Lareau Lab)

7:36-7:38 PM

Interpretable models of splicing using scRNA-seq

9

Charles Chien (Wagner Lab)

7:38-7:40 PM

Compass 2.0: A scalable flux-balance algorithmic suite for inferring single-cell metabolic states from atlas-scale transcriptomics

11

Jonathan Chiu-Chun Chou (Wolf Lab)

7:40-7:42 PM

Tracking plasmid and population dynamics within microbiome with antibiotic exposure

13

Nathan Cramer (Moorjani Lab)

7:42 - 7:44 PM

Spatial Genomic Scale and Determinants of Human Germline Mutation Landscape

15

Jack Demaray (Cress/Song Labs)

7:44 - 7:46 PM

Searching for additional functionality in bridge recombinases

17

Nicole Dubs (Krasileva Lab)

7:46 - 7:48 PM

Finding order in disorder: Understanding the role of intrinsically disordered regions in host-pathogen interactions

19

Jude Edwards (Krasileva Lab)

7:48 - 7:50 PM

Deciphering the language of fungal defense using a new model of fungal immunity

21

Kithmini Herath (Lucas Lab)

7:50 - 7:52 PM

Locating Macromolecules within Cryo-EM Images of Crowded Cell Environments with Deep Representation Learning

23

Sophie Joseph (Moorjani Lab)

7:52 - 7:54 PM

Investing the Landscape of Archaic Ancestry from Neanderthals in ancient humans from East Asia

25

Tiffany Lam (Wagner Lab)

7:54 - 7:56 PM

Mouse Knee Spatial Transcriptomics Reveals Injury Programs Associated with the Infrapatellar Fat Pad in Aging

27

Daniel Lewinsohn (Wagner/ Ioannidis Labs)

7:56 - 7:58 PM

Understanding immune cell metabolic responses to cytokine perturbation with MeRN

29

Alyssa Pratt (Seed Lab)

7:58 - 8:00 PM

Vibrio cholerae out of the clinic: genomic plasticity and bacteriophage defense repertoires found in diverse environmental strains

Saturday, October 25: Poster Pitch and Poster Session II, 7:30-8:00 PM

Poster Stand # Name Title

2

Carmelle Catamura (Lareau Lab)

7:30 - 7:32 PM

De novo splicing for allele-specific silencing of disease genes

4

Aniliese Deal (Brem Lab)

7:32 - 7:34 PM

Fungal whales: tracking the evolution of the yeast Kluyveromyces nonfermentans into the deep sea

6

Oberon Dixon-Luinenburg (Streets Lab)

7:34 - 7:36 PM

Factorizing sequence-context-dependent effects of epigenetic state with deep neural networks

8

Lucas Etourneau (Purdom Lab)

7:36 - 7:38 PM

Pirat: Peptide-level imputation for randomly truncated proteomic data

10

Matthew Giammar (Lucas Lab)

7:38 - 7:40 PM

Probing macromolecular structure using in situ cryo-EM and MOSAICS

12

Juliana Lee (Streets Lab)

7:40 - 7:42 PM

Massively parallel cell-free promoter screen

14

Philip Lee (Lewnard Lab)

7:42 - 7:44 PM

Surrogate Modeling for Infectious Disease Dynamics

16

Meaghan Marohn (Moorjani Lab)

7:44 - 7:46 PM

The Milk Paradox: Examining Lactase Persistence in South Asia

18

Caroline McCormack (Pickering Lab)

7:46 - 7:48 PM

A novel Cas9-based long-read targeted sequencing method for profiling antimicrobial resistance genes in wastewater within their genomic context

20

Michael Moubarak (Savage Lab)

7:48 - 7:50 PM

Understanding how cis-regulatory mutations affect crop phenotypes with machine learning

22

Michal Rozenwald (Streets/Urnov Labs)

7:50 - 7:52 PM

epiCG: a DNA methylation analysis software that allows for processing, filtering and learning from Oxford Nanopore Long read sequencing data

24

Chandler Sutherland (Krasileva Lab)

7:52 - 7:54 PM

Somatic mutation sequencing in Arabidopsis

26

Mark Young (Wolf Lab)

7:54 - 7:56 PM

Microbiome mediated resistance to bacterial dysentery in humans

28

Alex Zhao (Ioannidis/Yu Labs)

7:56 - 7:58 PM

Stabilizing protein fitness predictors via the PCS framework

30

Kevin Zhu (Song Lab)

7:58 - 8:00 PM

RNA Evolution using language models

32

Marissa Zintel (Staller Lab)

8:00 - 8:02 PM

ML-Guided Design of Strong Transcriptional Activation Domains